PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS62609.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family MYB_related
Protein Properties Length: 73aa    MW: 8517.83 Da    PI: 11.3092
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS62609.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.22.9e-16247247
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     ++WT+eE+++++++  +lG g+Wk I++ + k+R+  q+ s+ qky
       EPS62609.1  2 MPWTEEEHKKFLEGLDKLGRGNWKGISKIFVKTRSSTQVASHAQKY 47
                     69*******************************************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007174.2E-7150IPR001005SANT/Myb domain
PROSITE profilePS5129419.124152IPR017930Myb domain
SuperFamilySSF466893.59E-18253IPR009057Homeodomain-like
PfamPF002498.1E-14247IPR001005SANT/Myb domain
TIGRFAMsTIGR015573.4E-18251IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.604.0E-11347IPR009057Homeodomain-like
CDDcd001673.76E-9348No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 73 aa     Download sequence    Send to blast
GMPWTEEEHK KFLEGLDKLG RGNWKGISKI FVKTRSSTQV ASHAQKYFLR KSSMDKRKRR  60
NSVFDVRIVS AFS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006601240.11e-30PREDICTED: transcription factor MYB1R1-like
SwissprotQ8S9H72e-24DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLS8C7451e-47S8C745_9LAMI; Uncharacterized protein (Fragment)
STRINGGLYMA17G34791.13e-30(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33852147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.12e-30MYB_related family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]